Proposal: Officially Deprecate Support for Legacy (Single-Phase Init) Extension Modules

eric.snow · April 22, 2025, 11:31pm

We’ve had multi-phase init since 2013 (PEP 489), and in the intervening years the rough corners have been smoothed out. (Thanks @encukou!) There is also good documentation on how to switch. (Thanks again @encukou!) Multi-phase init provides a number of advantages. Notably, it is essential for both subinterpreters (PEP 684) and free-threading (PEP 703). Accommodating single-phase init also means a non-trivial amount of extra complexity in import.c (and friends).

I’d like to officially deprecate support for the legacy single-phase init mechanism, ideally in 3.14. This would involve:

update the docs
add a clear What’s New entry

This would not currently involve:

emit a DeprecationWarning or PendingDeprecationWarning
change any other runtime behavior
set a timeline for actually changing behavior or dropping support

Ultimately, it would be good to get the community moving toward wide-spread multi-phase init (and module isolation) and toward dropping single-phase init support. Introducing a soft deprecation like this would be a good starting point.

To be clear, with this proposal I’m not suggesting that we require extension maintainers to implement module isolation. That’s what people often think about when the topic of multi-phase init comes up. I’m only suggesting that we especially encourage the switch to just multi-phase init. While isolation (essentially module state + heap types) is an important goal, right now we can at least get people moving in that direction with the almost-trivial multi-phase init part.

AA-Turner · April 22, 2025, 11:43pm

Do we have a (rough) sense of what proportion of the top ~10,000 PyPI packages are still using single-phase initialisation?

A

eric.snow · April 22, 2025, 11:51pm

I don’t have any specific numbers. I expect the vast majority of modules are single-phase init, due to the various facets of community inertia.

oscarbenjamin · April 22, 2025, 11:58pm

It is good that you provide this link but can you also provide a link to what you are talking about?

Is there something that explains single/multi phase init somewhere?

Does this apply to (extension) modules generated with Cython or PyO3?

dg-pb · April 23, 2025, 12:03am

single
multi

oscarbenjamin · April 23, 2025, 12:19am

Thanks for the links. Neither of them really explains anything or gives useful (e.g. actionable) information though and I have no idea how it relates to extension modules generated by Cython. Maybe this is why Eric proposes to update the docs.

barry · April 23, 2025, 12:23am

Are there any extension modules in the stdlib that are still using single-phase init? If so, converting those would be a good start, and if so could that still be done for 3.14?

AA-Turner · April 23, 2025, 12:27am

Cython appears to use the CYTHON_PEP489_MULTI_PHASE_INIT macro, which is “on by default where supported”, meaning that you should get multi-phase initialisation by default. I don’t know the specifics of when it is deemed not supported, though.

A

ngoldbaum · April 23, 2025, 12:31am

Not sure about Cython but definitely PyO3. There’s a PR to update the macros to generate multi-phase init code but it’s a big complicated change.

eric.snow · April 23, 2025, 12:46am

IIRC the last multi-phase conversion wrapped up a year ago, for 3.13.

eric.snow · April 23, 2025, 12:52am

FYI, nearly all the stdlib modules are also fully isolated. There are only a handful of oddballs, like readline, that implement multi-phase init but are not fully isolated (and thus can’t be used in subinterpreters).

AA-Turner · April 23, 2025, 12:57am

Modules/readline.c, Modules/_tkinter.c, and Modules/_tracemalloc.c appear to use PyModule_Create(), but I don’t know if these represent special cases? This is the search I used: Code search results · GitHub

AA-Turner · April 23, 2025, 3:07am

It seems that 377 out of the top 10k projects^[1] (3.4%) use single-phase via PyModule_Create(). Searching for PyModuleDef_Init gives 126 projects using multi-phase, but this doesn’t include Cython projects, which will use multi-phase per the above. Searching for Python.h to proxy the number of projects with extension modules gives 607, for a rough single-phase percentage of 55.5%.

Full list and methodology below, using Hugo’s list of projects and Victor’s download and search scripts.

PS> python download_pypi_top.py pypi-top-2025-04 10000
PS> python search_pypi_top.py pypi-top-2025-04/ "\bPyModule_Create2?\b" --output single-phase.txt
Found 838 matching lines in 377 projects
PS> python search_pypi_top.py pypi-top-2025-04/ "\bPyModuleDef_Init\b" --output multi-phase.txt
Found 297 matching lines in 126 projects
PS> python search_pypi_top.py pypi-top-2025-04/ "\bPython.h\b"
Found 3232 matching lines in 607 projects

A

# single-phase init
accesscontrol-7.2.tar.gz: accesscontrol-7.2/src/AccessControl/cAccessControl.c
acquisition-6.1.tar.gz: acquisition-6.1/src/Acquisition/_Acquisition.c
aerospike-16.0.2.tar.gz: aerospike-16.0.2/src/main/aerospike.c
aerospike-16.0.2.tar.gz: aerospike-16.0.2/src/main/exception.c
aerospike-16.0.2.tar.gz: aerospike-16.0.2/src/main/predicates.c
aesara-2.9.4.tar.gz: aesara-2.9.4/aesara/link/c/c_code/lazylinker_c.c
aesara-2.9.4.tar.gz: aesara-2.9.4/aesara/link/c/cmodule.py
aesara-2.9.4.tar.gz: aesara-2.9.4/aesara/link/c/cutils.py
aggdraw-1.3.19.tar.gz: aggdraw-1.3.19/aggdraw.cxx
aioquic-1.2.0.tar.gz: aioquic-1.2.0/src/aioquic/_buffer.c
aioquic-1.2.0.tar.gz: aioquic-1.2.0/src/aioquic/_crypto.c
aiotieba-4.5.3.tar.gz: aiotieba-4.5.3/aiotieba/helper/crypto/src/tbcrypto/lib.c
amazon.ion-0.13.0.tar.gz: amazon.ion-0.13.0/amazon/ion/ioncmodule.c
amplpy-0.14.0.tar.gz: amplpy-0.14.0/amplpy/amplpython/cppinterface/amplpythonPYTHON_wrap.cxx
annoy-1.17.3.tar.gz: annoy-1.17.3/src/annoymodule.cc
apsw-3.49.1.0.tar.gz: apsw-3.49.1.0/src/apsw.c
apsw-3.49.1.0.tar.gz: apsw-3.49.1.0/src/faultinject.h
arraykit-0.10.0.tar.gz: arraykit-0.10.0/src/_arraykit.c
asammdf-8.2.9.tar.gz: asammdf-8.2.9/src/asammdf/blocks/cutils.c
Aspidites-1.16.1.tar.gz: Aspidites-1.16.1/Aspidites/_vendor/pyrsistent/pvectorcmodule.c
astropy-7.0.1.tar.gz: astropy-7.0.1/astropy/_compiler.c
astropy-7.0.1.tar.gz: astropy-7.0.1/astropy/cosmology/_signature_deprecations.c
astropy-7.0.1.tar.gz: astropy-7.0.1/astropy/io/fits/hdu/compressed/src/compression.c
astropy-7.0.1.tar.gz: astropy-7.0.1/astropy/io/votable/src/tablewriter.c
astropy-7.0.1.tar.gz: astropy-7.0.1/astropy/stats/src/fast_sigma_clip.c
astropy-7.0.1.tar.gz: astropy-7.0.1/astropy/time/src/parse_times.c
astropy-7.0.1.tar.gz: astropy-7.0.1/astropy/utils/src/compiler.c
astropy-7.0.1.tar.gz: astropy-7.0.1/astropy/utils/xml/src/iterparse.c
astropy-7.0.1.tar.gz: astropy-7.0.1/astropy/wcs/src/astropy_wcs.c
astropy_healpix-1.1.2.tar.gz: astropy_healpix-1.1.2/astropy_healpix/_compiler.c
astropy_healpix-1.1.2.tar.gz: astropy_healpix-1.1.2/astropy_healpix/_core.c
astroquery-0.4.10.tar.gz: astroquery-0.4.10/astropy_helpers/astropy_helpers/commands/src/compiler.c
asv-0.6.4.tar.gz: asv-0.6.4/asv/_rangemedian.cpp
asyncio-3.4.3.tar.gz: asyncio-3.4.3/overlapped.c
atheris-2.3.0.tar.gz: atheris-2.3.0/.eggs/pybind11-2.11.1-py3.11.egg/pybind11/include/pybind11/pybind11.h
auditwheel-6.3.0.tar.gz: auditwheel-6.3.0/tests/integration/nonpy_rpath/nonpy_rpath.cpp
auditwheel-6.3.0.tar.gz: auditwheel-6.3.0/tests/integration/test_glibcxx_3_4_25/testentropy.cpp
auditwheel-6.3.0.tar.gz: auditwheel-6.3.0/tests/integration/testdependencies/testdependencies.c
auditwheel-6.3.0.tar.gz: auditwheel-6.3.0/tests/integration/testrpath/src/testrpath/testrpath.c
auditwheel-6.3.0.tar.gz: auditwheel-6.3.0/tests/integration/testsimple/testsimple.c
auditwheel-6.3.0.tar.gz: auditwheel-6.3.0/tests/integration/testzlib/testzlib.c
awkward1-1.0.0.tar.gz: awkward1-1.0.0/pybind11/include/pybind11/pybind11.h
awscrt-0.26.1.tar.gz: awscrt-0.26.1/source/module.c
awslambdaric-3.0.2.tar.gz: awslambdaric-3.0.2/awslambdaric/runtime_client.cpp
backports_datetime_fromisoformat-2.0.3.tar.gz: backports_datetime_fromisoformat-2.0.3/backports/datetime_fromisoformat/module.c
basedmypy-2.10.0.tar.gz: basedmypy-2.10.0/mypyc/codegen/emitmodule.py
basedmypy-2.10.0.tar.gz: basedmypy-2.10.0/mypyc/lib-rt/test_capi.cc
biopython-1.85.tar.gz: biopython-1.85/Bio/Align/_aligncore.c
biopython-1.85.tar.gz: biopython-1.85/Bio/Align/_codonaligner.c
biopython-1.85.tar.gz: biopython-1.85/Bio/Align/_pairwisealigner.c
biopython-1.85.tar.gz: biopython-1.85/Bio/Cluster/clustermodule.c
biopython-1.85.tar.gz: biopython-1.85/Bio/cpairwise2module.c
biopython-1.85.tar.gz: biopython-1.85/Bio/motifs/_pwm.c
biopython-1.85.tar.gz: biopython-1.85/Bio/Nexus/cnexus.c
biopython-1.85.tar.gz: biopython-1.85/Bio/PDB/bcifhelpermodule.c
biopython-1.85.tar.gz: biopython-1.85/Bio/PDB/ccealignmodule.c
biopython-1.85.tar.gz: biopython-1.85/Bio/PDB/kdtrees.c
biopython-1.85.tar.gz: biopython-1.85/Bio/SeqIO/_twoBitIO.c
bitarray-3.3.1.tar.gz: bitarray-3.3.1/bitarray/_bitarray.c
bitarray-3.3.1.tar.gz: bitarray-3.3.1/bitarray/_util.c
bitstruct-8.20.0.tar.gz: bitstruct-8.20.0/src/bitstruct/c.c
blake3-1.0.4.tar.gz: blake3-1.0.4/c_impl/blake3module.c
blosc-1.11.2.tar.gz: blosc-1.11.2/blosc/blosc_extension.c
bottleneck-1.4.2.tar.gz: bottleneck-1.4.2/bottleneck/src/move_template.c
bottleneck-1.4.2.tar.gz: bottleneck-1.4.2/bottleneck/src/nonreduce_axis_template.c
bottleneck-1.4.2.tar.gz: bottleneck-1.4.2/bottleneck/src/nonreduce_template.c
bottleneck-1.4.2.tar.gz: bottleneck-1.4.2/bottleneck/src/reduce_template.c
Brotli-1.1.0.tar.gz: Brotli-1.1.0/python/_brotli.c
bsdiff4-1.2.6.tar.gz: bsdiff4-1.2.6/bsdiff4/core.c
btrees-6.1.tar.gz: btrees-6.1/src/BTrees/BTreeModuleTemplate.c
caio-0.9.22.tar.gz: caio-0.9.22/caio/linux_aio.c
caio-0.9.22.tar.gz: caio-0.9.22/caio/thread_aio.c
casadi-3.7.0.tar.gz: casadi-3.7.0/swig/python/target/source/casadiPYTHON_wrap.cxx
casadi-3.7.0.tar.gz: casadi-3.7.0/swig/python/target/source/casadiPYTHON_wrap_gil_release.cxx
casadi-3.7.0.tar.gz: casadi-3.7.0/swig/python/target3/source/casadiPYTHON_wrap.cxx
casadi-3.7.0.tar.gz: casadi-3.7.0/swig/python/target3/source/casadiPYTHON_wrap_gil_release.cxx
cassandra-driver-3.29.2.tar.gz: cassandra-driver-3.29.2/cassandra/cmurmur3.c
cassandra-driver-3.29.2.tar.gz: cassandra-driver-3.29.2/cassandra/io/libevwrapper.c
catboost-1.2.8.tar.gz: catboost-1.2.8/catboost_all_src/contrib/libs/pybind11/include/pybind11/pybind11.h
catboost-1.2.8.tar.gz: catboost-1.2.8/catboost_all_src/contrib/tools/swig/Lib/python/pyinit.swg
catboost-1.2.8.tar.gz: catboost-1.2.8/catboost_all_src/library/cpp/pybind/exceptions.cpp
catboost-1.2.8.tar.gz: catboost-1.2.8/catboost_all_src/library/cpp/pybind/module.h
catboost-1.2.8.tar.gz: catboost-1.2.8/catboost_all_src/library/python/symbols/module/module.cpp
cbor-1.0.0.tar.gz: cbor-1.0.0/c/cbormodule.c
cbor2-5.6.5.tar.gz: cbor2-5.6.5/source/module.c
cdifflib-1.2.9.tar.gz: cdifflib-1.2.9/_cdifflib3.c
cffi-1.17.1.tar.gz: cffi-1.17.1/src/c/_cffi_backend.c
cffi-1.17.1.tar.gz: cffi-1.17.1/src/c/cffi1_module.c
cffi-1.17.1.tar.gz: cffi-1.17.1/src/cffi/vengine_cpy.py
Cheetah3-3.2.6.post1.tar.gz: Cheetah3-3.2.6.post1/Cheetah/c/_namemapper.c
cibuildwheel-2.23.2.tar.gz: cibuildwheel-2.23.2/test/test_cpp_standards.py
cibuildwheel-2.23.2.tar.gz: cibuildwheel-2.23.2/test/test_projects/c.py
ciso8601-2.3.2.tar.gz: ciso8601-2.3.2/module.c
ckzg-2.1.1.tar.gz: ckzg-2.1.1/bindings/python/ckzg_wrap.c
clevercsv-0.8.3.tar.gz: clevercsv-0.8.3/src/abstraction.c
clevercsv-0.8.3.tar.gz: clevercsv-0.8.3/src/cparser.c
cobs-1.2.1.tar.gz: cobs-1.2.1/src/ext/_cobs_ext.c
cobs-1.2.1.tar.gz: cobs-1.2.1/src/ext/_cobsr_ext.c
cocotb-1.9.2.tar.gz: cocotb-1.9.2/cocotb/share/lib/simulator/simulatormodule.cpp
codecov_cli-10.4.0.tar.gz: codecov_cli-10.4.0/languages/languages.c
confluent_kafka-2.10.0.tar.gz: confluent_kafka-2.10.0/src/confluent_kafka/src/confluent_kafka.c
coolprop-6.8.0.tar.gz: coolprop-6.8.0/externals/multicomplex/multicomplex/externals/pybind11/include/pybind11/pybind11.h
coolprop-6.8.0.tar.gz: coolprop-6.8.0/externals/multicomplex/multicomplex/externals/pybind11/tests/cross_module_gil_utils.cpp
coolprop-6.8.0.tar.gz: coolprop-6.8.0/externals/pybind11/include/pybind11/pybind11.h
coolprop-6.8.0.tar.gz: coolprop-6.8.0/externals/pybind11/tests/cross_module_gil_utils.cpp
coolprop-6.8.0.tar.gz: coolprop-6.8.0/externals/pybind11/tests/cross_module_interleaved_error_already_set.cpp
coredis-4.20.0.tar.gz: coredis-4.20.0/coredis/speedups.c
coreforecast-0.0.16.tar.gz: coreforecast-0.0.16/external_libs/skiplist/src/cpy/cOrderedStructs.cpp
correctionlib-2.6.4.tar.gz: correctionlib-2.6.4/pybind11/include/pybind11/pybind11.h
correctionlib-2.6.4.tar.gz: correctionlib-2.6.4/pybind11/tests/cross_module_gil_utils.cpp
correctionlib-2.6.4.tar.gz: correctionlib-2.6.4/pybind11/tests/cross_module_interleaved_error_already_set.cpp
couchbase-4.3.5.tar.gz: couchbase-4.3.5/src/client.cxx
coverage-7.8.0.tar.gz: coverage-7.8.0/coverage/ctracer/module.c
crcmod-1.7.tar.gz: crcmod-1.7/python3/src/_crcfunext.c
crosshair_tool-0.0.86.tar.gz: crosshair_tool-0.0.86/crosshair/_tracers.c
ct3-3.4.0.tar.gz: ct3-3.4.0/Cheetah/c/_namemapper.c
cvxopt-1.3.2.tar.gz: cvxopt-1.3.2/src/C/amd.c
cvxopt-1.3.2.tar.gz: cvxopt-1.3.2/src/C/base.c
cvxopt-1.3.2.tar.gz: cvxopt-1.3.2/src/C/blas.c
cvxopt-1.3.2.tar.gz: cvxopt-1.3.2/src/C/cholmod.c
cvxopt-1.3.2.tar.gz: cvxopt-1.3.2/src/C/dsdp.c
cvxopt-1.3.2.tar.gz: cvxopt-1.3.2/src/C/fftw.c
cvxopt-1.3.2.tar.gz: cvxopt-1.3.2/src/C/glpk.c
cvxopt-1.3.2.tar.gz: cvxopt-1.3.2/src/C/gsl.c
cvxopt-1.3.2.tar.gz: cvxopt-1.3.2/src/C/lapack.c
cvxopt-1.3.2.tar.gz: cvxopt-1.3.2/src/C/misc_solvers.c
cvxopt-1.3.2.tar.gz: cvxopt-1.3.2/src/C/umfpack.c
cvxpy-1.6.5.tar.gz: cvxpy-1.6.5/cvxpy/cvxcore/python/cvxcore_wrap.cxx
cvxpy_base-1.6.5.tar.gz: cvxpy_base-1.6.5/cvxpy/cvxcore/python/cvxcore_wrap.cxx
cx_freeze-8.2.0.tar.gz: cx_freeze-8.2.0/source/util.c
cx_logging-3.2.1.tar.gz: cx_logging-3.2.1/src/cx_Logging.c
cx_Oracle-8.3.0.tar.gz: cx_Oracle-8.3.0/src/cxoModule.c
cython-3.0.12.tar.gz: cython-3.0.12/Cython/Compiler/ModuleNode.py
dbnd-1.0.28.1.tar.gz: dbnd-1.0.28.1/src/dbnd/_vendor/dulwich/_diff_tree.c
dbnd-1.0.28.1.tar.gz: dbnd-1.0.28.1/src/dbnd/_vendor/dulwich/_objects.c
dbnd-1.0.28.1.tar.gz: dbnd-1.0.28.1/src/dbnd/_vendor/dulwich/_pack.c
dbnd-1.0.28.1.tar.gz: dbnd-1.0.28.1/src/dbnd/_vendor/pendulum/_extensions/_helpers.c
dbus-python-1.4.0.tar.gz: dbus-python-1.4.0/dbus_bindings/module.c
dbus-python-1.4.0.tar.gz: dbus-python-1.4.0/dbus_glib_bindings/module.c
dbus-python-1.4.0.tar.gz: dbus-python-1.4.0/test/dbus_py_test.c
ddtrace-3.5.1.tar.gz: ddtrace-3.5.1/ddtrace/appsec/_iast/_ast/iastpatch.c
ddtrace-3.5.1.tar.gz: ddtrace-3.5.1/ddtrace/appsec/_iast/_stacktrace.c
ddtrace-3.5.1.tar.gz: ddtrace-3.5.1/ddtrace/appsec/_iast/_taint_tracking/_vendor/pybind11/include/pybind11/pybind11.h
ddtrace-3.5.1.tar.gz: ddtrace-3.5.1/ddtrace/appsec/_iast/_taint_tracking/native.cpp
ddtrace-3.5.1.tar.gz: ddtrace-3.5.1/ddtrace/internal/_threads.cpp
ddtrace-3.5.1.tar.gz: ddtrace-3.5.1/ddtrace/internal/datadog/profiling/stack_v2/src/stack_v2.cpp
ddtrace-3.5.1.tar.gz: ddtrace-3.5.1/ddtrace/profiling/collector/_memalloc.c
ddtrace-3.5.1.tar.gz: ddtrace-3.5.1/ddtrace/vendor/psutil/_psutil_aix.c
ddtrace-3.5.1.tar.gz: ddtrace-3.5.1/ddtrace/vendor/psutil/_psutil_bsd.c
ddtrace-3.5.1.tar.gz: ddtrace-3.5.1/ddtrace/vendor/psutil/_psutil_linux.c
ddtrace-3.5.1.tar.gz: ddtrace-3.5.1/ddtrace/vendor/psutil/_psutil_osx.c
ddtrace-3.5.1.tar.gz: ddtrace-3.5.1/ddtrace/vendor/psutil/_psutil_posix.c
ddtrace-3.5.1.tar.gz: ddtrace-3.5.1/ddtrace/vendor/psutil/_psutil_sunos.c
ddtrace-3.5.1.tar.gz: ddtrace-3.5.1/ddtrace/vendor/psutil/_psutil_windows.c
ddtrace-3.5.1.tar.gz: ddtrace-3.5.1/scripts/iast/valgrind-python.supp
deap-1.4.2.tar.gz: deap-1.4.2/deap/tools/_hypervolume/hv.cpp
delocate-0.13.0.tar.gz: delocate-0.13.0/wheel_makers/fakepkg1/fakepkg1/subpkg/module2.c
delocate-0.13.0.tar.gz: delocate-0.13.0/wheel_makers/fakepkg_namespace/namespace/subpkg/module2.c
delocate-0.13.0.tar.gz: delocate-0.13.0/wheel_makers/fakepkg_rpath/fakepkg/subpkg/module2.c
delocate-0.13.0.tar.gz: delocate-0.13.0/wheel_makers/fakepkg_toplevel/module2.c
Distance-0.1.3.tar.gz: distance/cdistance/distance.c
distlib-0.3.9.tar.gz: distlib-0.3.9/tests/minimext/calculate.c
dlib-19.24.8.tar.gz: dlib-19.24.8/dlib/external/pybind11/include/pybind11/pybind11.h
dockerfile-3.4.0.tar.gz: dockerfile-3.4.0/pylib/support.c
dukpy-0.5.0.tar.gz: dukpy-0.5.0/src/pyduktape.c
ecos-2.0.14.tar.gz: ecos-2.0.14/src/ecosmodule.c
ed25519-blake2b-1.4.1.tar.gz: ed25519-blake2b-1.4.1/src/ed25519-glue/ed25519module.c
efel-5.7.16.tar.gz: efel-5.7.16/efel/cppcore/cppcore.cpp
ephem-4.2.tar.gz: ephem-4.2/extensions/_libastro.c
epicscorelibs-7.0.7.99.1.1.tar.gz: epicscorelibs-7.0.7.99.1.1/src/python/epicscorelibs/base.cpp
evdev-1.9.1.tar.gz: evdev-1.9.1/src/evdev/genecodes_c.py
evdev-1.9.1.tar.gz: evdev-1.9.1/src/evdev/input.c
evdev-1.9.1.tar.gz: evdev-1.9.1/src/evdev/uinput.c
extension_helpers-1.2.0.tar.gz: extension_helpers-1.2.0/extension_helpers/src/compiler.c
extension_helpers-1.2.0.tar.gz: extension_helpers-1.2.0/extension_helpers/tests/test_setup_helpers.py
extensionclass-6.0.tar.gz: extensionclass-6.0/src/ComputedAttribute/_ComputedAttribute.c
extensionclass-6.0.tar.gz: extensionclass-6.0/src/ExtensionClass/_ExtensionClass.c
extensionclass-6.0.tar.gz: extensionclass-6.0/src/MethodObject/_MethodObject.c
fairseq-0.12.2.tar.gz: fairseq-0.12.2/fairseq/clib/libbleu/module.cpp
fast_histogram-0.14.tar.gz: fast_histogram-0.14/fast_histogram/_histogram_core.c
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fastecdsa-3.0.1.tar.gz: fastecdsa-3.0.1/src/_ecdsa.c
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da-woods · April 23, 2025, 6:12am

“Supported” for Cython means on Python 3 (and the next release of Cython will finally drop all Python 2 support and just have it on by default).

It’s been in Cython for a while. If you remove single-phase init then we’ll have to remove some tests that check that it still works, but that’s it.

I don’t know of any good reason to deliberately turn it off in Cython.

da-woods · April 23, 2025, 6:19am

Pybind11 is another widely used tool that uses single-phase init.

It’s on @AA-Turner’s list but I don’t think that list will capture anything that uses Pybind11 (so are very least, you’ll be breaking Scipy for example)

AA-Turner · April 23, 2025, 6:20am

cc @wjakob

ncoghlan · April 23, 2025, 12:14pm

Note that there are two different potential questions here (and @eric.snow is only asking the first one in this thread):

Firstly, is it reasonable to update the docs to stop suggesting that new projects should consider using single phase init as a viable option? (my view is that the answer to that is “Yes, that’s reasonable”, at least as far as the import system maintainers are aware. Multi-phase init makes extension modules behave more like their pure Python counterparts, and allows for subinterpreter and improved free-threading support. While single phase init served us well for a long time, it’s been more than a decade since we hit the limits of what we could feasibly contort it to handle and introduced multi-phase init as its replacement)
Secondly, is it reasonable to programmatically deprecate single phase initialisation? (the answer here is currently “No, it’s still too widely used”. We might revisit that question in the future, but forcing existing projects to change the way their extension modules work is a very different proposal than improving the guidance we give for folks setting up new projects)

steve.dower · April 23, 2025, 12:27pm

Can we deprecate “doing the things that are bad in single phase initialisation^[1] that multi-phase forces you not to do”? (Or at the very least, explicitly list them out.)

Implying both that they’re bad during initialisation, and also that they’re being done during initialisation. They don’t have to be deprecated all the time. ↩︎

da-woods · April 23, 2025, 12:33pm

I don’t think there’s anything free-threading related that currently requires multi-phase import. You can declare support with Module Objects — Python 3.13.3 documentation.

(You do need multi-phase import to declare support for subinterpeters though)

ngoldbaum · April 23, 2025, 12:40pm

While that’s true, in practice I found that most of the work of adding support for free-threading in NumPy amounted to identifying and isolating global state, which is also needed for multi-phase init.

Hopefully my work to move all the global state from a hodgepodge of global variables scattered across the codebase into a few global structs makes it easier to port NumPy’s extension modules to use multi-phase init.